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Quick Start Guide for shinyExprPortal3 years ago
Using the wizard | Creating a config template | Including new modules in the configuration | Deploying the portal remotely
Data Preparation Guide3 years ago
Validation checks | Additional files | Differential expression analysis results | Gene modules/lists | Asking for help
Full Configuration Guide3 years ago
Configuration file | Project details configuration | Data and global configurations | Modules | cohortOverview | compareTrajGroups | degDetails | degSummary | geneModulesHeatmap | geneProjectionOverlay | singleGeneCorr | singleMeasureCorr | multiMeasureCorr | Grouped modules | degModules | corrModules
Portal UI and Code Customization3 years ago
Customizing the portal UI | Global customizations | Module customization | Using custom modules
Documenting evaluation4 years ago
Preprocessing and clustering | Gap statistic | Other measures
visxhclust Shiny app tutorial5 years ago
Steps for simple iteration | Step 1: Loading data and setting parameters | Step 2: View clustering results | Step 3: Evaluate | Step 4: Change parameters again | Step 5: Review results
Documenting a workflow5 years ago
Preparing | Clustering | Results